Human SNP ID | rs823156 |
---|---|
Human chromosome | chr1 |
Human SNP position | 205795512 |
Pig chromosome | chr9 |
Pig SNP position | 72746977 |
PubMed ID | 21738487 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21738487 |
Study | Web-based genome-wide association study identifies two novel loci and a substantial genetic component for Parkinson__s disease. |
Disease/Trait | Parkinson__s disease |
Initial sample | 3,426 European ancestry cases, 29,624 European ancestry controls |
Replication sample | NA |
Region | 1q32.1 |
Chromosome id | chr1 |
Chromosome position | 205795512 |
Reported gene | SLC41A1 |
Mapped gene | SLC41A1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 254428 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs823156-A |
SNPs | rs823156 |
Merged | 0 |
SNP id current | 823156 |
Context | non_coding_transcript_exon_variant |
Intergenic | 0 |
Allele frequency | 0.82 |
P value | 0.0000001 |
Pvalue mlog | 7 |
P value text | |
Or beta | 1.21 |
%95 Ci | [1.12-1.30] |
Platform | Illumina [522782] |
CNV | N |
Mapped trait | Parkinson__s disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0002508 |
Study accession | GCST001126 |