SNP Detail For rs823156
1.Mapping Information
Human SNP ID rs823156
Human chromosome chr1
Human SNP position 205795512
Pig chromosome chr9
Pig SNP position 72746977
2.Annotation Information
PubMed ID21738487
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21738487
StudyWeb-based genome-wide association study identifies two novel loci and a substantial genetic component for Parkinson__s disease.
Disease/TraitParkinson__s disease
Initial sample3,426 European ancestry cases, 29,624 European ancestry controls
Replication sampleNA
Region1q32.1
Chromosome idchr1
Chromosome position205795512
Reported geneSLC41A1
Mapped geneSLC41A1
Upstream gene id
Downstream gene id
SNP gene ids254428
Upstream gene distance
Downstream gene distance
SNP risk allelers823156-A
SNPsrs823156
Merged0
SNP id current823156
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency0.82
P value0.0000001
Pvalue mlog7
P value text
Or beta1.21
%95 Ci[1.12-1.30]
PlatformIllumina [522782]
CNVN
Mapped traitParkinson__s disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002508
Study accessionGCST001126