SNP Detail For rs823118
1.Mapping Information
Human SNP ID rs823118
Human chromosome chr1
Human SNP position 205754444
Pig chromosome chr9
Pig SNP position 72705309
2.Annotation Information
PubMed ID25064009
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25064009
StudyLarge-scale meta-analysis of genome-wide association data identifies six new risk loci for Parkinson__s disease.
Disease/TraitParkinson__s disease
Initial sample13,708 European ancestry cases, 95,282 European ancestry controls
Replication sample5,353 European ancestry cases, 5,551 European ancestry controls
Region1q32.1
Chromosome idchr1
Chromosome position205754444
Reported geneNUCKS1, RAB7L1
Mapped geneNUCKS1 - RAB29
Upstream gene id64710
Downstream gene id8934
SNP gene ids
Upstream gene distance4200
Downstream gene distance13542
SNP risk allelers823118-T
SNPsrs823118
Merged0
SNP id current823118
Contextupstream_gene_variant
Intergenic1
Allele frequency0.559
P value0.0000000000000002
Pvalue mlog15.698970004336
P value text
Or beta1.122
%95 Ci[1.09-1.15]
PlatformIllumina [7893274] (imputed)
CNVN
Mapped traitParkinson__s disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002508
Study accessionGCST002544