SNP Detail For rs823094
1.Mapping Information
Human SNP ID rs823094
Human chromosome chr1
Human SNP position 205720679
Pig chromosome chr9
Pig SNP position 72672170
2.Annotation Information
PubMed ID23449627
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23449627
StudyGenome-wide association and longitudinal analyses reveal genetic loci linking pubertal height growth, pubertal timing and childhood adiposity.
Disease/TraitPubertal anthropometrics
Initial sample7,161 European ancestry males, 6,879 European ancestry females
Replication sample5,133 European ancestry males, 4,577 European ancestry females
Region1q32.1
Chromosome idchr1
Chromosome position205720679
Reported geneNUCKS1, RAB7L1
Mapped geneNUCKS1
Upstream gene id
Downstream gene id
SNP gene ids64710
Upstream gene distance
Downstream gene distance
SNP risk allelers823094-G
SNPsrs823094
Merged0
SNP id current823094
Contextintron_variant
Intergenic0
Allele frequency0.43
P value0.0000002
Pvalue mlog6.69897000433601
P value text(Single Height)
Or beta0.05
%95 Ci[0.03-0.07] unit decrease
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST001875