Human SNP ID | rs820430 |
---|---|
Human chromosome | chr3 |
Human SNP position | 27507409 |
Pig chromosome | chr13 |
Pig SNP position | 15665070 |
PubMed ID | 25249183 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25249183 |
Study | Genome-wide association study in Chinese identifies novel loci for blood pressure and hypertension. |
Disease/Trait | Systolic blood pressure |
Initial sample | 11,816 Han Chinese ancestry individuals |
Replication sample | 69,146 Han Chinese ancestry individuals |
Region | 3p24.1 |
Chromosome id | chr3 |
Chromosome position | 27507409 |
Reported gene | SLC4A7 |
Mapped gene | SLC4A7 - LOC105377005 |
Upstream gene id | 9497 |
Downstream gene id | 105377005 |
SNP gene ids | |
Upstream gene distance | 22989 |
Downstream gene distance | 5205 |
SNP risk allele | rs820430-A |
SNPs | rs820430 |
Merged | 0 |
SNP id current | 820430 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | 0.32 |
P value | 0.000000000001 |
Pvalue mlog | 12 |
P value text | |
Or beta | 0.76 |
%95 Ci | [0.54-0.98] unit increase |
Platform | Affymetrix, Illumina [2485448] (imputed) |
CNV | N |
Mapped trait | systolic blood pressure |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006335 |
Study accession | GCST002630 |
PubMed ID | 25249183 |
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25249183 |
Study | Genome-wide association study in Chinese identifies novel loci for blood pressure and hypertension. |
Disease/Trait | Diastolic blood pressure |
Initial sample | 11,816 Han Chinese ancestry individuals |
Replication sample | 69,146 Han Chinese ancestry individuals |
Region | 3p24.1 |
Chromosome id | chr3 |
Chromosome position | 27507409 |
Reported gene | SLC4A7 |
Mapped gene | SLC4A7 - LOC105377005 |
Upstream gene id | 9497 |
Downstream gene id | 105377005 |
SNP gene ids | |
Upstream gene distance | 22989 |
Downstream gene distance | 5205 |
SNP risk allele | rs820430-A |
SNPs | rs820430 |
Merged | 0 |
SNP id current | 820430 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | 0.32 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | 0.27 |
%95 Ci | [0.15-0.39] unit increase |
Platform | Affymetrix, Illumina [2485448] (imputed) |
CNV | N |
Mapped trait | diastolic blood pressure |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006336 |
Study accession | GCST002631 |
PubMed ID | 25249183 |
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25249183 |
Study | Genome-wide association study in Chinese identifies novel loci for blood pressure and hypertension. |
Disease/Trait | Hypertension |
Initial sample | 5,065 Han Chinese ancestry cases, 4,404 Han Chinese ancestry controls |
Replication sample | 29,799 Han Chinese ancestry cases, 39,347 Han Chinese ancestry controls |
Region | 3p24.1 |
Chromosome id | chr3 |
Chromosome position | 27507409 |
Reported gene | SLC4A7 |
Mapped gene | SLC4A7 - LOC105377005 |
Upstream gene id | 9497 |
Downstream gene id | 105377005 |
SNP gene ids | |
Upstream gene distance | 22989 |
Downstream gene distance | 5205 |
SNP risk allele | rs820430-A |
SNPs | rs820430 |
Merged | 0 |
SNP id current | 820430 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | 0.32 |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [2485448] (imputed) |
CNV | N |
Mapped trait | hypertension |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000537 |
Study accession | GCST002627 |