SNP Detail For rs820218
1.Mapping Information
Human SNP ID rs820218
Human chromosome chr17
Human SNP position 75691415
Pig chromosome chr12
Pig SNP position 5656998
2.Annotation Information
PubMed ID26350878
JournalJ Shoulder Elbow Surg
Linkwww.ncbi.nlm.nih.gov/pubmed/26350878
StudyGenome-wide association study for rotator cuff�tears identifies two significant single-nucleotide polymorphisms.
Disease/TraitRotator cuff tears
Initial sample311 European ancestry cases, 2,641 European ancestry controls
Replication sampleNA
Region17q25.1
Chromosome idchr17
Chromosome position75691415
Reported geneSAP30BP
Mapped geneSAP30BP
Upstream gene id
Downstream gene id
SNP gene ids29115
Upstream gene distance
Downstream gene distance
SNP risk allelers820218-?
SNPsrs820218
Merged
SNP id current820218
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequencyNR
P value0.000000004
Pvalue mlog8.39794000867203
P value text
Or beta
%95 Ci
PlatformIllumina [257558]
CNVN
Mapped traitrotator cuff tear
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_1001250
Study accessionGCST003115