Human SNP ID | rs820218 |
---|---|
Human chromosome | chr17 |
Human SNP position | 75691415 |
Pig chromosome | chr12 |
Pig SNP position | 5656998 |
PubMed ID | 26350878 |
---|---|
Journal | J Shoulder Elbow Surg |
Link | www.ncbi.nlm.nih.gov/pubmed/26350878 |
Study | Genome-wide association study for rotator cuff�tears identifies two significant single-nucleotide polymorphisms. |
Disease/Trait | Rotator cuff tears |
Initial sample | 311 European ancestry cases, 2,641 European ancestry controls |
Replication sample | NA |
Region | 17q25.1 |
Chromosome id | chr17 |
Chromosome position | 75691415 |
Reported gene | SAP30BP |
Mapped gene | SAP30BP |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 29115 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs820218-? |
SNPs | rs820218 |
Merged | |
SNP id current | 820218 |
Context | non_coding_transcript_exon_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000000004 |
Pvalue mlog | 8.39794000867203 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [257558] |
CNV | N |
Mapped trait | rotator cuff tear |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_1001250 |
Study accession | GCST003115 |