Human SNP ID | rs8176746 |
---|---|
Human chromosome | chr9 |
Human SNP position | 133255935 |
Pig chromosome | chr6 |
Pig SNP position | 39924623 |
PubMed ID | 20139978 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20139978 |
Study | Genome-wide association study of hematological and biochemical traits in a Japanese population. |
Disease/Trait | Mean corpuscular hemoglobin concentration |
Initial sample | 14,377 Japanese ancestry individuals |
Replication sample | NA |
Region | 9q34.2 |
Chromosome id | chr9 |
Chromosome position | 133255935 |
Reported gene | ABO |
Mapped gene | ABO |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 28 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs8176746-T |
SNPs | rs8176746 |
Merged | 0 |
SNP id current | 8176746 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | 0.18 |
P value | 0.00000004 |
Pvalue mlog | 7.39794000867203 |
P value text | |
Or beta | 0.084 |
%95 Ci | [0.055-0.113] unit increase |
Platform | Illumina [561583] |
CNV | N |
Mapped trait | hemoglobin measurement, mean corpuscular hemoglobin |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004509, http://www.ebi.ac.uk/efo/EFO_0004527 |
Study accession | GCST000582 |