SNP Detail For rs8176741
1.Mapping Information
Human SNP ID rs8176741
Human chromosome chr9
Human SNP position 133256074
Pig chromosome chr6
Pig SNP position 39924488
2.Annotation Information
PubMed ID24941225
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/24941225
StudyGenetic variations affecting serum carcinoembryonic antigen levels and status of regional lymph nodes in patients with sporadic colorectal cancer from Southern China.
Disease/TraitElevated serum carcinoembryonic antigen levels
Initial sample1,999 Chinese ancestry individuals
Replication sampleNA
Region9q34.2
Chromosome idchr9
Chromosome position133256074
Reported geneABO
Mapped geneABO
Upstream gene id
Downstream gene id
SNP gene ids28
Upstream gene distance
Downstream gene distance
SNP risk allelers8176741-?
SNPsrs8176741
Merged0
SNP id current8176741
Contextsynonymous_variant
Intergenic0
Allele frequency
P value2E-24
Pvalue mlog23.698970004336
P value text
Or beta
%95 Ci
PlatformIllumina [709211] (imputed)
CNVN
Mapped traitserum carcinoembryonic antigen measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005760
Study accessionGCST002485