SNP Detail For rs8176720
1.Mapping Information
Human SNP ID rs8176720
Human chromosome chr9
Human SNP position 133257486
Pig chromosome chr6
Pig SNP position 39924175
2.Annotation Information
PubMed ID24094242
JournalBMC Genomics
Linkwww.ncbi.nlm.nih.gov/pubmed/24094242
StudyGenome-wide association study on serum alkaline phosphatase levels in a Chinese population.
Disease/TraitSerum alkaline phosphatase levels
Initial sample1,452 Han Chinese ancestry individuals
Replication sample8,830 Han Chinese ancestry individuals
Region9q34.2
Chromosome idchr9
Chromosome position133257486
Reported geneABO
Mapped geneABO
Upstream gene id
Downstream gene id
SNP gene ids28
Upstream gene distance
Downstream gene distance
SNP risk allelers8176720-C
SNPsrs8176720
Merged0
SNP id current8176720
Contextsynonymous_variant
Intergenic0
Allele frequency0.452
P value3E-21
Pvalue mlog20.5228787452803
P value text
Or beta0.041
%95 Ci[0.033-0.049] U/L increase
PlatformAffymetrix [658288]
CNVN
Mapped traitalkaline phosphatase measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004533
Study accessionGCST002214