Human SNP ID | rs8176720 |
---|---|
Human chromosome | chr9 |
Human SNP position | 133257486 |
Pig chromosome | chr6 |
Pig SNP position | 39924175 |
PubMed ID | 24094242 |
---|---|
Journal | BMC Genomics |
Link | www.ncbi.nlm.nih.gov/pubmed/24094242 |
Study | Genome-wide association study on serum alkaline phosphatase levels in a Chinese population. |
Disease/Trait | Serum alkaline phosphatase levels |
Initial sample | 1,452 Han Chinese ancestry individuals |
Replication sample | 8,830 Han Chinese ancestry individuals |
Region | 9q34.2 |
Chromosome id | chr9 |
Chromosome position | 133257486 |
Reported gene | ABO |
Mapped gene | ABO |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 28 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs8176720-C |
SNPs | rs8176720 |
Merged | 0 |
SNP id current | 8176720 |
Context | synonymous_variant |
Intergenic | 0 |
Allele frequency | 0.452 |
P value | 3E-21 |
Pvalue mlog | 20.5228787452803 |
P value text | |
Or beta | 0.041 |
%95 Ci | [0.033-0.049] U/L increase |
Platform | Affymetrix [658288] |
CNV | N |
Mapped trait | alkaline phosphatase measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004533 |
Study accession | GCST002214 |