SNP Detail For rs8115222
1.Mapping Information
Human SNP ID rs8115222
Human chromosome chr20
Human SNP position 36277318
Pig chromosome chr17
Pig SNP position 44945749
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region20q11.23
Chromosome idchr20
Chromosome position36277318
Reported geneC20orf4
Mapped geneAAR2 - DLGAP4
Upstream gene id25980
Downstream gene id22839
SNP gene ids
Upstream gene distance20377
Downstream gene distance29005
SNP risk allelers8115222-G
SNPsrs8115222
Merged0
SNP id current8115222
Contextintergenic_variant
Intergenic1
Allele frequency0.015
P value0.000004
Pvalue mlog5.39794000867203
P value text(Sedentary&light activity )
Or beta0.04
%95 Ci[NR] min/d increase
PlatformIllumina [899892]
CNVN
Mapped traitphysical activity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003940
Study accessionGCST001762