SNP Detail For rs8103033
1.Mapping Information
Human SNP ID rs8103033
Human chromosome chr19
Human SNP position 39679413
Pig chromosome chr6
Pig SNP position 43943675
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region19q13.2
Chromosome idchr19
Chromosome position39679413
Reported geneLGALS17A
Mapped geneLGALS17A
Upstream gene id
Downstream gene id
SNP gene ids400696
Upstream gene distance
Downstream gene distance
SNP risk allelers8103033-G
SNPsrs8103033
Merged0
SNP id current8103033
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency0.458
P value0.000008
Pvalue mlog5.09691001300805
P value text(Urinary nitrogen )
Or beta0.04
%95 Ci[NR] g/d increase
PlatformIllumina [899892]
CNVN
Mapped traiturinary nitrogen measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005190
Study accessionGCST001762