SNP Detail For rs8097810
1.Mapping Information
Human SNP ID rs8097810
Human chromosome chr18
Human SNP position 26205684
Pig chromosome chr6
Pig SNP position 17270313
2.Annotation Information
PubMed ID24024966
JournalJ Clin Periodontol
Linkwww.ncbi.nlm.nih.gov/pubmed/24024966
StudyGenome-wide association study of chronic periodontitis in a general German population.
Disease/TraitPeriodontitis (Mean PAL)
Initial sampleup to 4,032 European ancestry individuals
Replication sampleNA
Region18q11.2
Chromosome idchr18
Chromosome position26205684
Reported genePSMA8
Mapped geneNPM1P2
Upstream gene id
Downstream gene id
SNP gene ids4871
Upstream gene distance
Downstream gene distance
SNP risk allelers8097810-A
SNPsrs8097810
Merged0
SNP id current8097810
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency0.94
P value0.000004
Pvalue mlog5.39794000867203
P value text(Age 20-60 years)
Or beta0.105
%95 Ci[0.060-0.150] unit increase
PlatformAffymetrix, Illumina [up to 17585496] (imputed)
CNVN
Mapped traitperiodontitis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000649
Study accessionGCST002127