Human SNP ID | rs809736 |
---|---|
Human chromosome | chr15 |
Human SNP position | 61037589 |
Pig chromosome | chr1 |
Pig SNP position | 122595789 |
PubMed ID | 19846067 |
---|---|
Journal | Biol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/19846067 |
Study | A genomewide association study of citalopram response in major depressive disorder. |
Disease/Trait | Response to citalopram treatment |
Initial sample | Up to 659 European ancestry responders, up to 121 African American responders, up to 103 Hispanic responders, 408 European ancestry non-responders, 120 African American non-responders, 80 Hispanic non-responders |
Replication sample | NA |
Region | 15q22.2 |
Chromosome id | chr15 |
Chromosome position | 61037589 |
Reported gene | RORA |
Mapped gene | RORA |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 6095 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs809736-? |
SNPs | rs809736 |
Merged | 0 |
SNP id current | 809736 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.17 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | (response) |
Or beta | 1.52 |
%95 Ci | [1.27-1.83] |
Platform | Affymetrix [430198] |
CNV | N |
Mapped trait | response to antidepressant |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0036276 |
Study accession | GCST000509 |