Human SNP ID | rs809 |
---|---|
Human chromosome | chr14 |
Human SNP position | 78090121 |
Pig chromosome | chr7 |
Pig SNP position | 107052763 |
PubMed ID | 26503763 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/26503763 |
Study | Genome-wide association study identifies SESTD1 as a novel risk gene for lithium-responsive bipolar disorder. |
Disease/Trait | Objective response to lithium treatment in bipolar disorder |
Initial sample | 323 European ancestry responder cases, 853 European ancestry non-responder cases |
Replication sample | NA |
Region | 14q24.3 |
Chromosome id | chr14 |
Chromosome position | 78090121 |
Reported gene | NRXN3 |
Mapped gene | NRXN3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 9369 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs809-T |
SNPs | rs809 |
Merged | 0 |
SNP id current | 809 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | 0.47 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 1.64 |
%95 Ci | [NR] |
Platform | Affymetrix, Illumina [> 8000000] (imputed) |
CNV | N |
Mapped trait | bipolar disorder, response to lithium ion |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000289, http://purl.obolibrary.org/obo/GO_0010226 |
Study accession | GCST003161 |