SNP Detail For rs8086028
1.Mapping Information
Human SNP ID rs8086028
Human chromosome chr18
Human SNP position 10737781
Pig chromosome JH118544-1
Pig SNP position 49034
2.Annotation Information
PubMed ID23509962
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23509962
StudyA genome-wide search for common SNP x SNP interactions on the risk of venous thrombosis.
Disease/TraitVenous thromboembolism (SNP x SNP interaction)
Initial sample411 European ancestry cases, 1,228 European ancestry controls
Replication sample1,542 European ancestry cases, 1,110 European ancestry controls
Region8q24.3 x 18p11.22
Chromosome idchr8 x 18
Chromosome position143483735 x 10737781
Reported geneNR x NR
Mapped geneZC3H3 x PIEZO2
Upstream gene id
Downstream gene id
SNP gene ids
Upstream gene distance
Downstream gene distance
SNP risk allelers380904-A x rs8086028-A
SNPsrs380904 x rs8086028
Merged0
SNP id current
Contextintron_variant x 3_prime_UTR_variant
Intergenic
Allele frequency
P value0.0000000005
Pvalue mlog9.30102999566398
P value text
Or beta1.67
%95 Ci[NR]
PlatformIllumina [291872]
CNVN
Mapped traitvenous thromboembolism
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004286
Study accessionGCST001913