Human SNP ID | rs8086028 |
---|---|
Human chromosome | chr18 |
Human SNP position | 10737781 |
Pig chromosome | JH118544-1 |
Pig SNP position | 49034 |
PubMed ID | 23509962 |
---|---|
Journal | BMC Med Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23509962 |
Study | A genome-wide search for common SNP x SNP interactions on the risk of venous thrombosis. |
Disease/Trait | Venous thromboembolism (SNP x SNP interaction) |
Initial sample | 411 European ancestry cases, 1,228 European ancestry controls |
Replication sample | 1,542 European ancestry cases, 1,110 European ancestry controls |
Region | 8q24.3 x 18p11.22 |
Chromosome id | chr8 x 18 |
Chromosome position | 143483735 x 10737781 |
Reported gene | NR x NR |
Mapped gene | ZC3H3 x PIEZO2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs380904-A x rs8086028-A |
SNPs | rs380904 x rs8086028 |
Merged | 0 |
SNP id current | |
Context | intron_variant x 3_prime_UTR_variant |
Intergenic | |
Allele frequency | |
P value | 0.0000000005 |
Pvalue mlog | 9.30102999566398 |
P value text | |
Or beta | 1.67 |
%95 Ci | [NR] |
Platform | Illumina [291872] |
CNV | N |
Mapped trait | venous thromboembolism |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004286 |
Study accession | GCST001913 |