SNP Detail For rs8077889
1.Mapping Information
Human SNP ID rs8077889
Human chromosome chr17
Human SNP position 43800798
Pig chromosome chr12
Pig SNP position 19557120
2.Annotation Information
PubMed ID24097068
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24097068
StudyDiscovery and refinement of loci associated with lipid levels.
Disease/TraitTriglycerides
Initial sample94,595 European ancestry individuals
Replication sample93,982 European ancestry individuals
Region17q21.31
Chromosome idchr17
Chromosome position43800798
Reported geneMPP3
Mapped geneC17orf105 - MPP3
Upstream gene id284067
Downstream gene id4356
SNP gene ids
Upstream gene distance15956
Downstream gene distance1
SNP risk allelers8077889-C
SNPsrs8077889
Merged0
SNP id current8077889
Contextdownstream_gene_variant
Intergenic1
Allele frequency0.22
P value0.00000001
Pvalue mlog8
P value text
Or beta0.025
%95 Ci[NR] mg/dL increase
PlatformNR [NR] (imputed)
CNVN
Mapped traittriglyceride measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004530
Study accessionGCST002216