SNP Detail For rs807624
1.Mapping Information
Human SNP ID rs807624
Human chromosome chr2
Human SNP position 15642347
Pig chromosome chr3
Pig SNP position 130141607
2.Annotation Information
PubMed ID22544364
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22544364
StudyA genome-wide association study identifies susceptibility loci for Wilms tumor.
Disease/TraitWilms tumor
Initial sample757 European ancestry cases, 1,879 European ancestry controls
Replication sample1,488 European ancestry cases, 3,851 European ancestry controls
Region2p24.3
Chromosome idchr2
Chromosome position15642347
Reported geneMYCN, DDX1
Mapped geneDDX1 - LOC101926966
Upstream gene id1653
Downstream gene id101926966
SNP gene ids
Upstream gene distance11236
Downstream gene distance48435
SNP risk allelers807624-A
SNPsrs807624
Merged0
SNP id current807624
Contextintergenic_variant
Intergenic1
Allele frequency0.35
P value0.00000000000001
Pvalue mlog14
P value text
Or beta1.33
%95 Ci[1.22-1.45]
PlatformIllumina [599255]
CNVN
Mapped traitNephroblastoma
Mapped trait URIhttp://www.orpha.net/ORDO/Orphanet_654
Study accessionGCST001500