Human SNP ID | rs807029 |
---|---|
Human chromosome | chr10 |
Human SNP position | 101004290 |
Pig chromosome | chr14 |
Pig SNP position | 121738879 |
PubMed ID | 24324551 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/24324551 |
Study | Genome wide association study (GWAS) of Chagas cardiomyopathy in Trypanosoma cruzi seropositive subjects. |
Disease/Trait | Ejection fraction in Tripanosoma cruzi seropositivity |
Initial sample | 580 Brazilian ancestry individuals |
Replication sample | NA |
Region | 10q24.31 |
Chromosome id | chr10 |
Chromosome position | 101004290 |
Reported gene | LZTS2 |
Mapped gene | LZTS2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 84445 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs807029-? |
SNPs | rs807029 |
Merged | 0 |
SNP id current | 807029 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000004 |
Pvalue mlog | 6.39794000867203 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix [5486770] (imputed) |
CNV | N |
Mapped trait | Trypanosoma cruzi seropositivity, ejection fraction measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005530, http://www.ebi.ac.uk/efo/EFO_0005527 |
Study accession | GCST002281 |