Human SNP ID | rs8068318 |
---|---|
Human chromosome | chr17 |
Human SNP position | 61406405 |
Pig chromosome | chr12 |
Pig SNP position | 38331671 |
PubMed ID | 20383145 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20383145 |
Study | Genetic loci influencing kidney function and chronic kidney disease. |
Disease/Trait | Creatinine levels |
Initial sample | 23,812 European ancestry individuals |
Replication sample | 16,626 European ancestry individuals |
Region | 17q23.2 |
Chromosome id | chr17 |
Chromosome position | 61406405 |
Reported gene | TBX2 |
Mapped gene | TBX2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 6909 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs8068318-G |
SNPs | rs8068318 |
Merged | 0 |
SNP id current | 8068318 |
Context | non_coding_transcript_exon_variant |
Intergenic | 0 |
Allele frequency | 0.27 |
P value | 0.0000000003 |
Pvalue mlog | 9.52287874528033 |
P value text | |
Or beta | 0.8 |
%95 Ci | [0.6-1.0] % increase |
Platform | Affymetrix, Illumina, Perlegen [~ 2600000] (imputed) |
CNV | N |
Mapped trait | serum creatinine measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004518 |
Study accession | GCST000651 |