SNP Detail For rs8057551
1.Mapping Information
Human SNP ID rs8057551
Human chromosome chr16
Human SNP position 27423606
Pig chromosome chr3
Pig SNP position 19705192
2.Annotation Information
PubMed ID19874204
JournalJ Bone Miner Res
Linkwww.ncbi.nlm.nih.gov/pubmed/19874204
StudyIL21R and PTH may underlie variation of femoral neck bone mineral density as revealed by a genome-wide association study.
Disease/TraitBone mineral density
Initial sample983 European ancestry individuals
Replication sample2,557 European ancestry individuals from 750 families
Region16p12.1
Chromosome idchr16
Chromosome position27423606
Reported geneIL21R
Mapped geneIL21R
Upstream gene id
Downstream gene id
SNP gene ids50615
Upstream gene distance
Downstream gene distance
SNP risk allelers8057551-G
SNPsrs8057551
Merged0
SNP id current8057551
Contextintron_variant
Intergenic0
Allele frequency0.32
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.11
%95 Ci[NR] s.d. increase
PlatformAffymetrix [342854]
CNVN
Mapped traitbone density
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003923
Study accessionGCST000515