SNP Detail For rs8055236
1.Mapping Information
Human SNP ID rs8055236
Human chromosome chr16
Human SNP position 83178793
Pig chromosome chr6
Pig SNP position 5856068
2.Annotation Information
PubMed ID17554300
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/17554300
StudyGenome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.
Disease/TraitCoronary heart disease
Initial sample1,926 European ancestry cases, 2,938 European ancestry controls
Replication sample(see Samani 2007)
Region16q23.3
Chromosome idchr16
Chromosome position83178793
Reported geneintergenic
Mapped geneCDH13
Upstream gene id
Downstream gene id
SNP gene ids1012
Upstream gene distance
Downstream gene distance
SNP risk allelers8055236-G
SNPsrs8055236
Merged0
SNP id current8055236
Contextintron_variant
Intergenic0
Allele frequency0.8
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta1.91
%95 Ci[1.33-2.74]
PlatformAffymetrix [469557]
CNVN
Mapped traitcoronary heart disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001645
Study accessionGCST000045