Human SNP ID | rs8055236 |
---|---|
Human chromosome | chr16 |
Human SNP position | 83178793 |
Pig chromosome | chr6 |
Pig SNP position | 5856068 |
PubMed ID | 17554300 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/17554300 |
Study | Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls. |
Disease/Trait | Coronary heart disease |
Initial sample | 1,926 European ancestry cases, 2,938 European ancestry controls |
Replication sample | (see Samani 2007) |
Region | 16q23.3 |
Chromosome id | chr16 |
Chromosome position | 83178793 |
Reported gene | intergenic |
Mapped gene | CDH13 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1012 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs8055236-G |
SNPs | rs8055236 |
Merged | 0 |
SNP id current | 8055236 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.8 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 1.91 |
%95 Ci | [1.33-2.74] |
Platform | Affymetrix [469557] |
CNV | N |
Mapped trait | coronary heart disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001645 |
Study accession | GCST000045 |