SNP Detail For rs8050907
1.Mapping Information
Human SNP ID rs8050907
Human chromosome chr16
Human SNP position 4596877
Pig chromosome chr3
Pig SNP position 38830054
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region16p13.3
Chromosome idchr16
Chromosome position4596877
Reported geneC16orf96, LOC342346
Mapped geneC16orf96
Upstream gene id
Downstream gene id
SNP gene ids342346
Upstream gene distance
Downstream gene distance
SNP risk allelers8050907-A
SNPsrs8050907
Merged0
SNP id current8050907
Contextintron_variant
Intergenic0
Allele frequency0.027
P value0.0000007
Pvalue mlog6.15490195998574
P value text(Total antioxidants )
Or beta0.03
%95 Ci[NR] mM increase
PlatformIllumina [899892]
CNVN
Mapped traitantioxidant measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005119
Study accessionGCST001762