Human SNP ID | rs8050907 |
---|---|
Human chromosome | chr16 |
Human SNP position | 4596877 |
Pig chromosome | chr3 |
Pig SNP position | 38830054 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 16p13.3 |
Chromosome id | chr16 |
Chromosome position | 4596877 |
Reported gene | C16orf96, LOC342346 |
Mapped gene | C16orf96 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 342346 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs8050907-A |
SNPs | rs8050907 |
Merged | 0 |
SNP id current | 8050907 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.027 |
P value | 0.0000007 |
Pvalue mlog | 6.15490195998574 |
P value text | (Total antioxidants ) |
Or beta | 0.03 |
%95 Ci | [NR] mM increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | antioxidant measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005119 |
Study accession | GCST001762 |