Human SNP ID | rs804292 |
---|---|
Human chromosome | chr8 |
Human SNP position | 11786406 |
Pig chromosome | chr14 |
Pig SNP position | 16154130 |
PubMed ID | 23942779 |
---|---|
Journal | Behav Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23942779 |
Study | A genome-wide association study of behavioral disinhibition. |
Disease/Trait | Nicotine use |
Initial sample | 7,188 European ancestry individuals |
Replication sample | NA |
Region | 8p23.1 |
Chromosome id | chr8 |
Chromosome position | 11786406 |
Reported gene | NEIL2 |
Mapped gene | NEIL2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 252969 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs804292-G |
SNPs | rs804292 |
Merged | 0 |
SNP id current | 804292 |
Context | 3_prime_UTR_variant |
Intergenic | 0 |
Allele frequency | 0.234 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 6.529 |
%95 Ci | [NR] unit decrease |
Platform | Illumina [527829] |
CNV | N |
Mapped trait | nicotine use |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005430 |
Study accession | GCST002135 |
PubMed ID | 23942779 |
Journal | Behav Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23942779 |
Study | A genome-wide association study of behavioral disinhibition. |
Disease/Trait | Alcohol dependence |
Initial sample | 7,188 European ancestry individuals |
Replication sample | NA |
Region | 8p23.1 |
Chromosome id | chr8 |
Chromosome position | 11786406 |
Reported gene | NEIL2 |
Mapped gene | NEIL2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 252969 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs804292-G |
SNPs | rs804292 |
Merged | 0 |
SNP id current | 804292 |
Context | 3_prime_UTR_variant |
Intergenic | 0 |
Allele frequency | 0.234 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 0.414 |
%95 Ci | [NR] unit decrease |
Platform | Illumina [527829] |
CNV | N |
Mapped trait | alcohol dependence |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003829 |
Study accession | GCST002134 |