SNP Detail For rs804280
1.Mapping Information
Human SNP ID rs804280
Human chromosome chr8
Human SNP position 11755189
Pig chromosome chr14
Pig SNP position 16121567
2.Annotation Information
PubMed ID23049088
JournalInvest Ophthalmol Vis Sci
Linkwww.ncbi.nlm.nih.gov/pubmed/23049088
StudyA genome-wide association study provides evidence for association of chromosome 8p23 (MYP10) and 10q21.1 (MYP15) with high myopia in the French Population.
Disease/TraitMyopia (pathological)
Initial sample187 European ancestry cases, 1064 European ancestry controls
Replication sample
Region8p23.1
Chromosome idchr8
Chromosome position11755189
Reported geneGATA4
Mapped geneGATA4
Upstream gene id
Downstream gene id
SNP gene ids2626
Upstream gene distance
Downstream gene distance
SNP risk allelers804280-?
SNPsrs804280
Merged0
SNP id current804280
Contextintron_variant
Intergenic0
Allele frequency0.406
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta
%95 Ci[NR]
PlatformAffymetrix, Illumina [152234]
CNVN
Mapped traitpathological myopia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004207
Study accessionGCST001712