Human SNP ID | rs8034595 |
---|---|
Human chromosome | chr15 |
Human SNP position | 96176000 |
Pig chromosome | chr7 |
Pig SNP position | 89115977 |
PubMed ID | 25631615 |
---|---|
Journal | Genet Epidemiol |
Link | www.ncbi.nlm.nih.gov/pubmed/25631615 |
Study | Meta-analysis of Genome-Wide Association Studies Identifies Novel Loci Associated With Optic Disc Morphology. |
Disease/Trait | Optic disc area |
Initial sample | 15,117 European ancestry individuals, 2,131 Erasmus Rucphen Family individuals, 2,405 Chinese ancestry individuals, 2,305 Malay ancestry individuals, 2,131 Indian ancestry individuals |
Replication sample | NA |
Region | 15q26.2 |
Chromosome id | chr15 |
Chromosome position | 96176000 |
Reported gene | NR2F2 |
Mapped gene | NR2F2-AS1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 644192 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs8034595-A |
SNPs | rs8034595 |
Merged | 0 |
SNP id current | 8034595 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.28 |
P value | 0.00000003 |
Pvalue mlog | 7.52287874528033 |
P value text | |
Or beta | 0.026 |
%95 Ci | [0.016-0.036] unit decrease |
Platform | Affymetrix, Illumina [2500000] (imputed) |
CNV | N |
Mapped trait | optic disc area measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006937 |
Study accession | GCST002763 |