SNP Detail For rs8034595
1.Mapping Information
Human SNP ID rs8034595
Human chromosome chr15
Human SNP position 96176000
Pig chromosome chr7
Pig SNP position 89115977
2.Annotation Information
PubMed ID25631615
JournalGenet Epidemiol
Linkwww.ncbi.nlm.nih.gov/pubmed/25631615
StudyMeta-analysis of Genome-Wide Association Studies Identifies Novel Loci Associated With Optic Disc Morphology.
Disease/TraitOptic disc area
Initial sample15,117 European ancestry individuals, 2,131 Erasmus Rucphen Family individuals, 2,405 Chinese ancestry individuals, 2,305 Malay ancestry individuals, 2,131 Indian ancestry individuals
Replication sampleNA
Region15q26.2
Chromosome idchr15
Chromosome position96176000
Reported geneNR2F2
Mapped geneNR2F2-AS1
Upstream gene id
Downstream gene id
SNP gene ids644192
Upstream gene distance
Downstream gene distance
SNP risk allelers8034595-A
SNPsrs8034595
Merged0
SNP id current8034595
Contextintron_variant
Intergenic0
Allele frequency0.28
P value0.00000003
Pvalue mlog7.52287874528033
P value text
Or beta0.026
%95 Ci[0.016-0.036] unit decrease
PlatformAffymetrix, Illumina [2500000] (imputed)
CNVN
Mapped traitoptic disc area measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006937
Study accessionGCST002763