Human SNP ID | rs8032158 |
---|---|
Human chromosome | chr15 |
Human SNP position | 55902679 |
Pig chromosome | chr1 |
Pig SNP position | 128498264 |
PubMed ID | 20711176 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20711176 |
Study | A genome-wide association study identifies four susceptibility loci for keloid in the Japanese population. |
Disease/Trait | Keloid |
Initial sample | 178 Japanese ancestry cases, 906 Japanese ancestry controls |
Replication sample | 621 Japanese ancestry cases, 2,271 Japanese ancestry controls |
Region | 15q21.3 |
Chromosome id | chr15 |
Chromosome position | 55902679 |
Reported gene | NEDD4 |
Mapped gene | NEDD4 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 4734 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs8032158-C |
SNPs | rs8032158 |
Merged | 0 |
SNP id current | 8032158 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.36 |
P value | 0.0000000000006 |
Pvalue mlog | 12.2218487496163 |
P value text | |
Or beta | 1.51 |
%95 Ci | [1.35-1.69] |
Platform | Illumina [452038] |
CNV | N |
Mapped trait | Keloid |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004212 |
Study accession | GCST000773 |