Human SNP ID | rs80311637 |
---|---|
Human chromosome | chr3 |
Human SNP position | 64550972 |
Pig chromosome | chr13 |
Pig SNP position | 50546518 |
PubMed ID | 24124411 |
---|---|
Journal | Genomics Inform |
Link | www.ncbi.nlm.nih.gov/pubmed/24124411 |
Study | Genome-wide association study of liver enzymes in korean children. |
Disease/Trait | Liver enzyme levels (alanine transaminase) |
Initial sample | 484 Korean ancestry children |
Replication sample | NA |
Region | 3p14.1 |
Chromosome id | chr3 |
Chromosome position | 64550972 |
Reported gene | ADAMTS9 |
Mapped gene | ADAMTS9 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 56999 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs80311637-A |
SNPs | rs80311637 |
Merged | 0 |
SNP id current | 80311637 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | 0.029 |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | |
Or beta | 0.137 |
%95 Ci | [0.078-0.196] unit increase |
Platform | Illumina [747076] |
CNV | N |
Mapped trait | serum alanine aminotransferase measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004735 |
Study accession | GCST002207 |
PubMed ID | 24124411 |
Journal | Genomics Inform |
Link | www.ncbi.nlm.nih.gov/pubmed/24124411 |
Study | Genome-wide association study of liver enzymes in korean children. |
Disease/Trait | Liver enzyme levels (aspartate transaminase) |
Initial sample | 484 Korean ancestry children |
Replication sample | NA |
Region | 3p14.1 |
Chromosome id | chr3 |
Chromosome position | 64550972 |
Reported gene | ADAMTS9 |
Mapped gene | ADAMTS9 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 56999 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs80311637-A |
SNPs | rs80311637 |
Merged | 0 |
SNP id current | 80311637 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | 0.029 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 0.078 |
%95 Ci | [0.047-0.109] unit increase |
Platform | Illumina [747076] |
CNV | N |
Mapped trait | aspartate aminotransferase measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004736 |
Study accession | GCST002208 |