SNP Detail For rs8028579
1.Mapping Information
Human SNP ID rs8028579
Human chromosome chr15
Human SNP position 47713273
Pig chromosome chr1
Pig SNP position 138101158
2.Annotation Information
PubMed ID23870195
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23870195
StudyGenetics of coronary artery calcification among African Americans, a meta-analysis.
Disease/TraitCoronary artery calcification
Initial sample5,823 African American individuals
Replication sample9,992 European ancestry individuals
Region15q21.1
Chromosome idchr15
Chromosome position47713273
Reported geneSEMA6D
Mapped geneSEMA6D
Upstream gene id
Downstream gene id
SNP gene ids80031
Upstream gene distance
Downstream gene distance
SNP risk allelers8028579-T
SNPsrs8028579
Merged0
SNP id current8028579
Contextintron_variant
Intergenic0
Allele frequency0.11
P value0.000007
Pvalue mlog5.15490195998574
P value text(AA)
Or beta0.3
%95 Ci[0.16-0.44] unit increase
PlatformAffymetrix, Illumina [up to 2727966] (imputed)
CNVN
Mapped traitcoronary artery calcification
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004723
Study accessionGCST002097