SNP Detail For rs8022296
1.Mapping Information
Human SNP ID rs8022296
Human chromosome chr14
Human SNP position 97521520
Pig chromosome chr7
Pig SNP position 125886437
2.Annotation Information
PubMed ID23648065
JournalCancer Sci
Linkwww.ncbi.nlm.nih.gov/pubmed/23648065
StudyGenome-wide association study of chemotherapeutic agent-induced severe neutropenia/leucopenia for patients in Biobank Japan.
Disease/TraitAdverse response to chemotherapy (neutropenia/leucopenia) (all antimicrotubule drugs)
Initial sample371 Japanese ancestry cases, 825 Japanese ancestry controls
Replication sampleNA
Region14q32.2
Chromosome idchr14
Chromosome position97521520
Reported geneLOC100129345
Mapped geneLOC101929241
Upstream gene id
Downstream gene id
SNP gene ids101929241
Upstream gene distance
Downstream gene distance
SNP risk allelers8022296-G
SNPsrs8022296
Merged0
SNP id current8022296
Contextintron_variant
Intergenic0
Allele frequency0.608
P value0.000007
Pvalue mlog5.15490195998574
P value text(Recessive model)
Or beta1.269
%95 Ci[1.058-1.521]
PlatformIllumina [733202]
CNVN
Mapped traitresponse to antineoplastic agent, response to antimicrotubule agent
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097327, http://www.ebi.ac.uk/efo/EFO_0005260
Study accessionGCST002001