SNP Detail For rs8021963
1.Mapping Information
Human SNP ID rs8021963
Human chromosome chr14
Human SNP position 89831931
Pig chromosome chr7
Pig SNP position 118219006
2.Annotation Information
PubMed ID23319000
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/23319000
StudyGenome-wide association study of monoamine metabolite levels in human cerebrospinal fluid.
Disease/TraitMetabolite levels (HVA/MHPG ratio)
Initial sampleup to 398 European ancestry individuals
Replication sampleNA
Region14q32.11
Chromosome idchr14
Chromosome position89831931
Reported geneBX247991, EFCAB11
Mapped geneEFCAB11
Upstream gene id
Downstream gene id
SNP gene ids90141
Upstream gene distance
Downstream gene distance
SNP risk allelers8021963-C
SNPsrs8021963
Merged0
SNP id current8021963
Contextintron_variant
Intergenic0
Allele frequency
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.3002
%95 Ciunit increase
PlatformIllumina [5767231] (imputed)
CNVN
Mapped traitHVA measurement, MHPG measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005131, http://www.ebi.ac.uk/efo/EFO_0005133
Study accessionGCST001823