SNP Detail For rs8014907
1.Mapping Information
Human SNP ID rs8014907
Human chromosome chr14
Human SNP position 92333660
Pig chromosome chr7
Pig SNP position 120449001
2.Annotation Information
PubMed ID26184321
JournalGenes
Linkwww.ncbi.nlm.nih.gov/pubmed/26184321
StudyHeritability and Genome-Wide Association Studies for Hair Color in a Dutch Twin Family Based Sample.
Disease/TraitBlond vs non-blond hair color
Initial sample2,888 European ancestry blond hair individuals, 4,203 European ancestry non-blond hair individuals
Replication sampleNA
Region14q32.12
Chromosome idchr14
Chromosome position92333660
Reported geneSLC24A4
Mapped geneSLC24A4
Upstream gene id
Downstream gene id
SNP gene ids123041
Upstream gene distance
Downstream gene distance
SNP risk allelers8014907-?
SNPsrs8014907
Merged
SNP id current8014907
Contextintron_variant
Intergenic0
Allele frequency0.178
P value0.0000000003
Pvalue mlog9.52287874528033
P value text
Or beta1.4317
%95 Ci[1.32-1.54]
PlatformAffymetrix, Illumina, Perlegen [6473680] (imputed)
CNVN
Mapped traithair color
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003924
Study accessionGCST003023
PubMed ID26184321
JournalGenes
Linkwww.ncbi.nlm.nih.gov/pubmed/26184321
StudyHeritability and Genome-Wide Association Studies for Hair Color in a Dutch Twin Family Based Sample.
Disease/TraitBrown vs. non-brown hair color
Initial sample3,826 European ancestry brown hair individuals, 3,265 European ancestry non-brown hair individuals
Replication sampleNA
Region14q32.12
Chromosome idchr14
Chromosome position92333660
Reported geneSLC24A4
Mapped geneSLC24A4
Upstream gene id
Downstream gene id
SNP gene ids123041
Upstream gene distance
Downstream gene distance
SNP risk allelers8014907-?
SNPsrs8014907
Merged
SNP id current8014907
Contextintron_variant
Intergenic0
Allele frequency0.822
P value0.000000003
Pvalue mlog8.52287874528033
P value text
Or beta1.3770311
%95 Ci[1.27-1.48]
PlatformAffymetrix, Illumina, Perlegen [6473680] (imputed)
CNVN
Mapped traithair color
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003924
Study accessionGCST003021
PubMed ID26184321
JournalGenes
Linkwww.ncbi.nlm.nih.gov/pubmed/26184321
StudyHeritability and Genome-Wide Association Studies for Hair Color in a Dutch Twin Family Based Sample.
Disease/TraitLight vs. dark hair color
Initial sample3,069 European ancestry light hair individuals, 4,022 European ancestry dark hair individuals
Replication sampleNA
Region14q32.12
Chromosome idchr14
Chromosome position92333660
Reported geneSLC24A4
Mapped geneSLC24A4
Upstream gene id
Downstream gene id
SNP gene ids123041
Upstream gene distance
Downstream gene distance
SNP risk allelers8014907-?
SNPsrs8014907
Merged
SNP id current8014907
Contextintron_variant
Intergenic0
Allele frequency0.822
P value0.0000000003
Pvalue mlog9.52287874528033
P value text
Or beta1.4228799
%95 Ci[1.32-1.53]
PlatformAffymetrix, Illumina, Perlegen [6473680] (imputed)
CNVN
Mapped traithair color
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003924
Study accessionGCST003022