Human SNP ID | rs8014131 |
---|---|
Human chromosome | chr14 |
Human SNP position | 85497512 |
Pig chromosome | chr7 |
Pig SNP position | 114236692 |
PubMed ID | 23599027 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23599027 |
Study | Genome-wide association study of age at menarche in African-American women. |
Disease/Trait | Menarche (age at onset) |
Initial sample | 18,089 African American individuals |
Replication sample | 2,850 African American individuals, 87,802 European ancestry inidividuals |
Region | 14q31.3 |
Chromosome id | chr14 |
Chromosome position | 85497512 |
Reported gene | FLRT2 |
Mapped gene | LINC00911 - LOC100506731 |
Upstream gene id | 100996280 |
Downstream gene id | 100506731 |
SNP gene ids | |
Upstream gene distance | 77438 |
Downstream gene distance | 26920 |
SNP risk allele | rs8014131-A |
SNPs | rs8014131 |
Merged | 0 |
SNP id current | 8014131 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.42 |
P value | 0.0000003 |
Pvalue mlog | 6.52287874528033 |
P value text | (AA) |
Or beta | 4.61 |
%95 Ci | [2.85-6.37] unit decrease |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | age at menarche |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004703 |
Study accession | GCST001973 |