Human SNP ID | rs8012283 |
---|---|
Human chromosome | chr14 |
Human SNP position | 50767442 |
Pig chromosome | chr1 |
Pig SNP position | 200815551 |
PubMed ID | 24925725 |
---|---|
Journal | J Am Soc Nephrol |
Link | www.ncbi.nlm.nih.gov/pubmed/24925725 |
Study | Lupus nephritis susceptibility Loci in women with systemic lupus erythematosus. |
Disease/Trait | Lupus nephritis in systemic lupus erythematosus |
Initial sample | 588 European ancestry cases, 1,412 European ancestry controls |
Replication sample | NA |
Region | 14q22.1 |
Chromosome id | chr14 |
Chromosome position | 50767442 |
Reported gene | MAP4K5, NIN, SPG3A, SAV1 |
Mapped gene | NIN |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 51199 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs8012283-G |
SNPs | rs8012283 |
Merged | 0 |
SNP id current | 8012283 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.0000003 |
Pvalue mlog | 6.52287874528033 |
P value text | (Additive) |
Or beta | 1.64 |
%95 Ci | [1.35-1.98] |
Platform | Affymetrix, Illumina [1621689] (imputed) |
CNV | N |
Mapped trait | systemic lupus erythematosus, lupus nephritis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0002690, http://www.ebi.ac.uk/efo/EFO_0005761 |
Study accession | GCST002479 |