SNP Detail For rs8012283
1.Mapping Information
Human SNP ID rs8012283
Human chromosome chr14
Human SNP position 50767442
Pig chromosome chr1
Pig SNP position 200815551
2.Annotation Information
PubMed ID24925725
JournalJ Am Soc Nephrol
Linkwww.ncbi.nlm.nih.gov/pubmed/24925725
StudyLupus nephritis susceptibility Loci in women with systemic lupus erythematosus.
Disease/TraitLupus nephritis in systemic lupus erythematosus
Initial sample588 European ancestry cases, 1,412 European ancestry controls
Replication sampleNA
Region14q22.1
Chromosome idchr14
Chromosome position50767442
Reported geneMAP4K5, NIN, SPG3A, SAV1
Mapped geneNIN
Upstream gene id
Downstream gene id
SNP gene ids51199
Upstream gene distance
Downstream gene distance
SNP risk allelers8012283-G
SNPsrs8012283
Merged0
SNP id current8012283
Contextintron_variant
Intergenic0
Allele frequency
P value0.0000003
Pvalue mlog6.52287874528033
P value text(Additive)
Or beta1.64
%95 Ci[1.35-1.98]
PlatformAffymetrix, Illumina [1621689] (imputed)
CNVN
Mapped traitsystemic lupus erythematosus, lupus nephritis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002690, http://www.ebi.ac.uk/efo/EFO_0005761
Study accessionGCST002479