SNP Detail For rs8010717
1.Mapping Information
Human SNP ID rs8010717
Human chromosome chr14
Human SNP position 79944098
Pig chromosome chr7
Pig SNP position 109063668
2.Annotation Information
PubMed ID25189868
JournalAm J Hypertens
Linkwww.ncbi.nlm.nih.gov/pubmed/25189868
StudyGene-Smoking Interactions Identify Several Novel Blood Pressure Loci in the Framingham Heart Study.
Disease/TraitBlood pressure (smoking interaction)
Initial sampleUp to 6,889 individuals
Replication sampleNA
Region14q31.1
Chromosome idchr14
Chromosome position79944098
Reported geneNRXN3, LOC730007
Mapped geneLOC105370582 - LOC105370590
Upstream gene id105370582
Downstream gene id105370590
SNP gene ids
Upstream gene distance26994
Downstream gene distance28270
SNP risk allelers8010717-?
SNPsrs8010717
Merged0
SNP id current8010717
Contextintron_variant
Intergenic1
Allele frequencyNR
P value0.0000003
Pvalue mlog6.52287874528033
P value text(SBP,CPD)
Or beta
%95 Ci
PlatformAffymetrix [2485435] (imputed)
CNVN
Mapped traitsystolic blood pressure, cigarettes per day measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006335, http://www.ebi.ac.uk/efo/EFO_0006525
Study accessionGCST002587
PubMed ID25189868
JournalAm J Hypertens
Linkwww.ncbi.nlm.nih.gov/pubmed/25189868
StudyGene-Smoking Interactions Identify Several Novel Blood Pressure Loci in the Framingham Heart Study.
Disease/TraitBlood pressure (smoking interaction)
Initial sampleUp to 6,889 individuals
Replication sampleNA
Region14q31.1
Chromosome idchr14
Chromosome position79944098
Reported geneNRXN3, LOC730007
Mapped geneLOC105370582 - LOC105370590
Upstream gene id105370582
Downstream gene id105370590
SNP gene ids
Upstream gene distance26994
Downstream gene distance28270
SNP risk allelers8010717-?
SNPsrs8010717
Merged0
SNP id current8010717
Contextintron_variant
Intergenic1
Allele frequencyNR
P value0.0000001
Pvalue mlog7
P value text(SBP,Pack-years)
Or beta
%95 Ci
PlatformAffymetrix [2485435] (imputed)
CNVN
Mapped traitpack-years measurement, systolic blood pressure
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006526, http://www.ebi.ac.uk/efo/EFO_0006335
Study accessionGCST002587
PubMed ID25189868
JournalAm J Hypertens
Linkwww.ncbi.nlm.nih.gov/pubmed/25189868
StudyGene-Smoking Interactions Identify Several Novel Blood Pressure Loci in the Framingham Heart Study.
Disease/TraitBlood pressure (smoking interaction)
Initial sampleUp to 6,889 individuals
Replication sampleNA
Region14q31.1
Chromosome idchr14
Chromosome position79944098
Reported geneNRXN3, LOC730007
Mapped geneLOC105370582 - LOC105370590
Upstream gene id105370582
Downstream gene id105370590
SNP gene ids
Upstream gene distance26994
Downstream gene distance28270
SNP risk allelers8010717-?
SNPsrs8010717
Merged0
SNP id current8010717
Contextintron_variant
Intergenic1
Allele frequencyNR
P value0.0000001
Pvalue mlog7
P value text(SBP,Smoking)
Or beta
%95 Ci
PlatformAffymetrix [2485435] (imputed)
CNVN
Mapped traitsmoking behavior, smoking status measurement, systolic blood pressure
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004318, http://www.ebi.ac.uk/efo/EFO_0006527, http://www.ebi.ac.uk/efo/EFO_0006335
Study accessionGCST002587