SNP Detail For rs8010715
1.Mapping Information
Human SNP ID rs8010715
Human chromosome chr14
Human SNP position 24139938
Pig chromosome chr7
Pig SNP position 80432148
2.Annotation Information
PubMed ID23382691
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23382691
StudyLoci associated with N-glycosylation of human immunoglobulin G show pleiotropy with autoimmune diseases and haematological cancers.
Disease/TraitIgG glycosylation
Initial sample2,247 European ancestry individuals
Replication sampleNA
Region14q12
Chromosome idchr14
Chromosome position24139938
Reported geneNR
Mapped geneEMC9
Upstream gene id
Downstream gene id
SNP gene ids51016
Upstream gene distance
Downstream gene distance
SNP risk allelers8010715-C
SNPsrs8010715
Merged0
SNP id current8010715
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency0.262775408381632
P value0.000009
Pvalue mlog5.04575749056067
P value text(IGP75)
Or beta0.1664
%95 Ci[0.093-0.24] unit increase
PlatformIllumina [~ 2500000] (imputed)
CNVN
Mapped traitserum IgG glycosylation measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005193
Study accessionGCST001848