SNP Detail For rs8002180
1.Mapping Information
Human SNP ID rs8002180
Human chromosome chr13
Human SNP position 95270511
Pig chromosome chr11
Pig SNP position 70458460
2.Annotation Information
PubMed ID24816252
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24816252
StudyAn atlas of genetic influences on human blood metabolites.
Disease/TraitBlood metabolite levels
Initial sample7,824 European ancestry individuals
Replication sampleNA
Region13q32.1
Chromosome idchr13
Chromosome position95270511
Reported geneABCC4
Mapped geneABCC4
Upstream gene id
Downstream gene id
SNP gene ids10257
Upstream gene distance
Downstream gene distance
SNP risk allelers8002180-T
SNPsrs8002180
Merged0
SNP id current8002180
Contextintron_variant
Intergenic0
Allele frequency0.72
P value8E-23
Pvalue mlog22.096910013008
P value text(X-12244--N-acetylcarnosine)
Or beta0.024
%95 Ci[0.02-0.028] unit decrease
PlatformAffymetrix, Illumina [2100000] (imputed)
CNVN
Mapped traitblood metabolite measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005664
Study accessionGCST002443