Human SNP ID | rs7996217 |
---|---|
Human chromosome | chr13 |
Human SNP position | 101348594 |
Pig chromosome | chr11 |
Pig SNP position | 77266284 |
PubMed ID | 22628157 |
---|---|
Journal | Am J Med Genet B Neuropsychiatr Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22628157 |
Study | Genome-wide association study of neurocognitive impairment and dementia in HIV-infected adults. |
Disease/Trait | HIV-associated dementia |
Initial sample | 1,287 European ancestry HIV-infected male individuals |
Replication sample | NA |
Region | 13q33.1 |
Chromosome id | chr13 |
Chromosome position | 101348594 |
Reported gene | NALCN |
Mapped gene | NALCN |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 259232 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7996217-T |
SNPs | rs7996217 |
Merged | 0 |
SNP id current | 7996217 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000007 |
Pvalue mlog | 6.15490195998574 |
P value text | (SPEED) |
Or beta | |
%95 Ci | |
Platform | Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | AIDS dementia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0002608 |
Study accession | GCST001542 |