SNP Detail For rs79947808
1.Mapping Information
Human SNP ID rs79947808
Human chromosome chr7
Human SNP position 128227402
Pig chromosome chr18
Pig SNP position 21225767
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region7q32.1
Chromosome idchr7
Chromosome position128227402
Reported geneNR
Mapped geneLOC101928423 - LOC105375494
Upstream gene id101928423
Downstream gene id105375494
SNP gene ids
Upstream gene distance2971
Downstream gene distance8281
SNP risk allelers79947808-G
SNPsrs79947808
Merged
SNP id current79947808
Contextregulatory_region_variant
Intergenic1
Allele frequencyNR
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta1.1363636
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048