SNP Detail For rs79764963
1.Mapping Information
Human SNP ID rs79764963
Human chromosome chr2
Human SNP position 117065840
Pig chromosome chr15
Pig SNP position 26236578
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio in COPD
Initial sample5,439 European ancestry current and former smoker cases, 821 African American current and former smoker cases
Replication sampleNA
Region2q14.1
Chromosome idchr2
Chromosome position117065840
Reported geneIntergenic
Mapped geneMTCO1P43 - RNU7-190P
Upstream gene id107075173
Downstream gene id106479096
SNP gene ids
Upstream gene distance38816
Downstream gene distance73875
SNP risk allelers79764963-T
SNPsrs79764963
Merged0
SNP id current79764963
Contextintergenic_variant
Intergenic1
Allele frequency0.989
P value0.000004
Pvalue mlog5.39794000867203
P value text(AA)
Or beta0.159
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, chronic obstructive pulmonary disease, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0000341, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003265