Human SNP ID | rs796127 |
---|---|
Human chromosome | chr10 |
Human SNP position | 31679801 |
Pig chromosome | chr10 |
Pig SNP position | 46950291 |
PubMed ID | 24763700 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/24763700 |
Study | New variants including ARG1 polymorphisms associated with C-reactive protein levels identified by genome-wide association and pathway analysis. |
Disease/Trait | C-reactive protein levels |
Initial sample | 7,626 Korean ancestry individuals |
Replication sample | 903 Korean ancestry individuals |
Region | 10p11.22 |
Chromosome id | chr10 |
Chromosome position | 31679801 |
Reported gene | ARHGAP12 |
Mapped gene | LOC105376484 - LOC101929951 |
Upstream gene id | 105376484 |
Downstream gene id | 101929951 |
SNP gene ids | |
Upstream gene distance | 58928 |
Downstream gene distance | 13281 |
SNP risk allele | rs796127-T |
SNPs | rs796127 |
Merged | 0 |
SNP id current | 796127 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 0.093 |
%95 Ci | [NR] unit decrease |
Platform | Affymetrix [1219546] (imputed) |
CNV | N |
Mapped trait | C-reactive protein measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004458 |
Study accession | GCST002424 |