SNP Detail For rs796127
1.Mapping Information
Human SNP ID rs796127
Human chromosome chr10
Human SNP position 31679801
Pig chromosome chr10
Pig SNP position 46950291
2.Annotation Information
PubMed ID24763700
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/24763700
StudyNew variants including ARG1 polymorphisms associated with C-reactive protein levels identified by genome-wide association and pathway analysis.
Disease/TraitC-reactive protein levels
Initial sample7,626 Korean ancestry individuals
Replication sample903 Korean ancestry individuals
Region10p11.22
Chromosome idchr10
Chromosome position31679801
Reported geneARHGAP12
Mapped geneLOC105376484 - LOC101929951
Upstream gene id105376484
Downstream gene id101929951
SNP gene ids
Upstream gene distance58928
Downstream gene distance13281
SNP risk allelers796127-T
SNPsrs796127
Merged0
SNP id current796127
Contextregulatory_region_variant
Intergenic1
Allele frequency
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta0.093
%95 Ci[NR] unit decrease
PlatformAffymetrix [1219546] (imputed)
CNVN
Mapped traitC-reactive protein measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004458
Study accessionGCST002424