SNP Detail For rs79481971
1.Mapping Information
Human SNP ID rs79481971
Human chromosome chr5
Human SNP position 43554017
Pig chromosome chr16
Pig SNP position 29654781
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio in COPD
Initial sample5,439 European ancestry current and former smoker cases, 821 African American current and former smoker cases
Replication sampleNA
Region5p12
Chromosome idchr5
Chromosome position43554017
Reported genePAIP1
Mapped genePAIP1
Upstream gene id
Downstream gene id
SNP gene ids10605
Upstream gene distance
Downstream gene distance
SNP risk allelers79481971-C
SNPsrs79481971
Merged0
SNP id current79481971
Contextintron_variant
Intergenic0
Allele frequency0.963
P value0.000002
Pvalue mlog5.69897000433601
P value text(AA)
Or beta0.075
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, chronic obstructive pulmonary disease, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0000341, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003265