Human SNP ID | rs794185 |
---|---|
Human chromosome | chr3 |
Human SNP position | 4395674 |
Pig chromosome | chr13 |
Pig SNP position | 67277550 |
PubMed ID | 20802204 |
---|---|
Journal | Brain |
Link | www.ncbi.nlm.nih.gov/pubmed/20802204 |
Study | Genetic variation influences glutamate concentrations in brains of patients with multiple sclerosis. |
Disease/Trait | Multiple sclerosis--Brain Glutamate Levels |
Initial sample | 382 cases |
Replication sample | NA |
Region | 3p26.1 |
Chromosome id | chr3 |
Chromosome position | 4395674 |
Reported gene | SUMF1 |
Mapped gene | SUMF1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 285362 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs794185-? |
SNPs | rs794185 |
Merged | 0 |
SNP id current | 794185 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000006 |
Pvalue mlog | 6.22184874961635 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [~ 500000] |
CNV | N |
Mapped trait | multiple sclerosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003885 |
Study accession | GCST000783 |