SNP Detail For rs794185
1.Mapping Information
Human SNP ID rs794185
Human chromosome chr3
Human SNP position 4395674
Pig chromosome chr13
Pig SNP position 67277550
2.Annotation Information
PubMed ID20802204
JournalBrain
Linkwww.ncbi.nlm.nih.gov/pubmed/20802204
StudyGenetic variation influences glutamate concentrations in brains of patients with multiple sclerosis.
Disease/TraitMultiple sclerosis--Brain Glutamate Levels
Initial sample382 cases
Replication sampleNA
Region3p26.1
Chromosome idchr3
Chromosome position4395674
Reported geneSUMF1
Mapped geneSUMF1
Upstream gene id
Downstream gene id
SNP gene ids285362
Upstream gene distance
Downstream gene distance
SNP risk allelers794185-?
SNPsrs794185
Merged0
SNP id current794185
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000006
Pvalue mlog6.22184874961635
P value text
Or beta
%95 Ci
PlatformIllumina [~ 500000]
CNVN
Mapped traitmultiple sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003885
Study accessionGCST000783