SNP Detail For rs7927727
1.Mapping Information
Human SNP ID rs7927727
Human chromosome chr11
Human SNP position 13634539
Pig chromosome chr2
Pig SNP position 48941525
2.Annotation Information
PubMed ID26480920
JournalInt J Obes (Lond)
Linkwww.ncbi.nlm.nih.gov/pubmed/26480920
StudyGenome-wide association studies suggest sex-specific loci associated with abdominal and visceral fat.
Disease/TraitVisceral adipose tissue adjusted for BMI
Initial sample1,152 European ancestry males, 1,361 European ancestry females
Replication sampleNA
Region11p15.3
Chromosome idchr11
Chromosome position13634539
Reported geneFAR1
Mapped genePTH - FAR1
Upstream gene id5741
Downstream gene id84188
SNP gene ids
Upstream gene distance138519
Downstream gene distance34120
SNP risk allelers7927727-A
SNPsrs7927727
Merged0
SNP id current7927727
Contextintergenic_variant
Intergenic1
Allele frequency0.37
P value0.0000002
Pvalue mlog6.69897000433601
P value text(women)
Or beta0.03
%95 Ci[NR] unit decrease
PlatformAffymetrix, Illumina [2473256] (imputed)
CNVN
Mapped traitvisceral adipose tissue measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004765
Study accessionGCST003172