Human SNP ID | rs7927727 |
---|---|
Human chromosome | chr11 |
Human SNP position | 13634539 |
Pig chromosome | chr2 |
Pig SNP position | 48941525 |
PubMed ID | 26480920 |
---|---|
Journal | Int J Obes (Lond) |
Link | www.ncbi.nlm.nih.gov/pubmed/26480920 |
Study | Genome-wide association studies suggest sex-specific loci associated with abdominal and visceral fat. |
Disease/Trait | Visceral adipose tissue adjusted for BMI |
Initial sample | 1,152 European ancestry males, 1,361 European ancestry females |
Replication sample | NA |
Region | 11p15.3 |
Chromosome id | chr11 |
Chromosome position | 13634539 |
Reported gene | FAR1 |
Mapped gene | PTH - FAR1 |
Upstream gene id | 5741 |
Downstream gene id | 84188 |
SNP gene ids | |
Upstream gene distance | 138519 |
Downstream gene distance | 34120 |
SNP risk allele | rs7927727-A |
SNPs | rs7927727 |
Merged | 0 |
SNP id current | 7927727 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.37 |
P value | 0.0000002 |
Pvalue mlog | 6.69897000433601 |
P value text | (women) |
Or beta | 0.03 |
%95 Ci | [NR] unit decrease |
Platform | Affymetrix, Illumina [2473256] (imputed) |
CNV | N |
Mapped trait | visceral adipose tissue measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004765 |
Study accession | GCST003172 |