SNP Detail For rs79258494
1.Mapping Information
Human SNP ID rs79258494
Human chromosome chr9
Human SNP position 23576502
Pig chromosome chr1
Pig SNP position 222207455
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region9p21.3
Chromosome idchr9
Chromosome position23576502
Reported geneNR
Mapped geneLOC101929563
Upstream gene id
Downstream gene id
SNP gene ids101929563
Upstream gene distance
Downstream gene distance
SNP risk allelers79258494-A
SNPsrs79258494
Merged
SNP id current79258494
Contextintergenic_variant
Intergenic0
Allele frequencyNR
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta1.06
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048