Human SNP ID | rs7923837 |
---|---|
Human chromosome | chr10 |
Human SNP position | 92722160 |
Pig chromosome | chr14 |
Pig SNP position | 113823464 |
PubMed ID | 21833088 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/21833088 |
Study | Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis. |
Disease/Trait | Multiple sclerosis |
Initial sample | 9,772 European ancestry cases, 16,849 European ancestry controls |
Replication sample | 4,218 European ancestry cases, 7,296 European ancestry controls |
Region | 10q23.33 |
Chromosome id | chr10 |
Chromosome position | 92722160 |
Reported gene | HHEX |
Mapped gene | HHEX - EXOC6 |
Upstream gene id | 3087 |
Downstream gene id | 54536 |
SNP gene ids | |
Upstream gene distance | 26509 |
Downstream gene distance | 112553 |
SNP risk allele | rs7923837-G |
SNPs | rs7923837 |
Merged | 0 |
SNP id current | 7923837 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000000005 |
Pvalue mlog | 8.30102999566398 |
P value text | |
Or beta | 1.1 |
%95 Ci | [1.08-1.11] |
Platform | Illumina [465434] |
CNV | N |
Mapped trait | multiple sclerosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003885 |
Study accession | GCST001198 |