SNP Detail For rs7923837
1.Mapping Information
Human SNP ID rs7923837
Human chromosome chr10
Human SNP position 92722160
Pig chromosome chr14
Pig SNP position 113823464
2.Annotation Information
PubMed ID21833088
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/21833088
StudyGenetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis.
Disease/TraitMultiple sclerosis
Initial sample9,772 European ancestry cases, 16,849 European ancestry controls
Replication sample4,218 European ancestry cases, 7,296 European ancestry controls
Region10q23.33
Chromosome idchr10
Chromosome position92722160
Reported geneHHEX
Mapped geneHHEX - EXOC6
Upstream gene id3087
Downstream gene id54536
SNP gene ids
Upstream gene distance26509
Downstream gene distance112553
SNP risk allelers7923837-G
SNPsrs7923837
Merged0
SNP id current7923837
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000000005
Pvalue mlog8.30102999566398
P value text
Or beta1.1
%95 Ci[1.08-1.11]
PlatformIllumina [465434]
CNVN
Mapped traitmultiple sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003885
Study accessionGCST001198