SNP Detail For rs79238367
1.Mapping Information
Human SNP ID rs79238367
Human chromosome chr15
Human SNP position 37055464
Pig chromosome chr1
Pig SNP position 149931118
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1 in COPD
Initial sample5,439 European ancestry current and former smoker cases, 821 African American current and former smoker cases
Replication sampleNA
Region15q14
Chromosome idchr15
Chromosome position37055464
Reported geneMEIS2
Mapped geneMEIS2
Upstream gene id
Downstream gene id
SNP gene ids4212
Upstream gene distance
Downstream gene distance
SNP risk allelers79238367-C
SNPsrs79238367
Merged0
SNP id current79238367
Contextintron_variant
Intergenic0
Allele frequency0.928
P value0.000005
Pvalue mlog5.30102999566398
P value text(AA)
Or beta0.249
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitforced expiratory volume, response to bronchodilator, chronic obstructive pulmonary disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0000341
Study accessionGCST003263