Human SNP ID | rs79238367 |
---|---|
Human chromosome | chr15 |
Human SNP position | 37055464 |
Pig chromosome | chr1 |
Pig SNP position | 149931118 |
PubMed ID | 26634245 |
---|---|
Journal | BMC Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26634245 |
Study | A genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry. |
Disease/Trait | Post bronchodilator FEV1 in COPD |
Initial sample | 5,439 European ancestry current and former smoker cases, 821 African American current and former smoker cases |
Replication sample | NA |
Region | 15q14 |
Chromosome id | chr15 |
Chromosome position | 37055464 |
Reported gene | MEIS2 |
Mapped gene | MEIS2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 4212 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs79238367-C |
SNPs | rs79238367 |
Merged | 0 |
SNP id current | 79238367 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.928 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | (AA) |
Or beta | 0.249 |
%95 Ci | NR unit increase |
Platform | Illumina [NR] (imputed) |
CNV | N |
Mapped trait | forced expiratory volume, response to bronchodilator, chronic obstructive pulmonary disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0000341 |
Study accession | GCST003263 |