Human SNP ID | rs791888 |
---|---|
Human chromosome | chr10 |
Human SNP position | 87652818 |
Pig chromosome | chr14 |
Pig SNP position | 108644399 |
PubMed ID | 25886283 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/25886283 |
Study | Genome-wide association study of serum minerals levels in children of different ethnic background. |
Disease/Trait | Magnesium levels |
Initial sample | 2,317 European ancestry children, 1,283 African-American ancestry children |
Replication sample | NA |
Region | 10q23.2 |
Chromosome id | chr10 |
Chromosome position | 87652818 |
Reported gene | NR |
Mapped gene | LOC105378412 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105378412 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs791888-T |
SNPs | rs791888 |
Merged | 0 |
SNP id current | 791888 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000004 |
Pvalue mlog | 6.39794000867203 |
P value text | |
Or beta | 0.0243 |
%95 Ci | [NR] mg/dl increase |
Platform | Illumina [up to 509150] |
CNV | N |
Mapped trait | magnesium measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004845 |
Study accession | GCST002860 |
PubMed ID | 25886283 |
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/25886283 |
Study | Genome-wide association study of serum minerals levels in children of different ethnic background. |
Disease/Trait | Magnesium levels |
Initial sample | 2,317 European ancestry children, 1,283 African-American ancestry children |
Replication sample | NA |
Region | 10q23.2 |
Chromosome id | chr10 |
Chromosome position | 87652818 |
Reported gene | NR |
Mapped gene | LOC105378412 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105378412 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs791888-T |
SNPs | rs791888 |
Merged | 0 |
SNP id current | 791888 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (EA) |
Or beta | 0.02742 |
%95 Ci | (0.01614-0.03871) mg/dl increase |
Platform | Illumina [up to 509150] |
CNV | N |
Mapped trait | magnesium measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004845 |
Study accession | GCST002860 |