SNP Detail For rs79169085
1.Mapping Information
Human SNP ID rs79169085
Human chromosome chr17
Human SNP position 48220153
Pig chromosome chr12
Pig SNP position 24117126
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region17q21.32
Chromosome idchr17
Chromosome position48220153
Reported geneNR
Mapped geneSKAP1
Upstream gene id
Downstream gene id
SNP gene ids8631
Upstream gene distance
Downstream gene distance
SNP risk allelers79169085-C
SNPsrs79169085
Merged
SNP id current79169085
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta1.2195122
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048