Human SNP ID | rs79090407 |
---|---|
Human chromosome | chr16 |
Human SNP position | 26505812 |
Pig chromosome | chr3 |
Pig SNP position | 20351337 |
PubMed ID | 26198764 |
---|---|
Journal | Am J Med Genet B Neuropsychiatr Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26198764 |
Study | Genome-wide association study of schizophrenia in Ashkenazi Jews. |
Disease/Trait | Schizophrenia |
Initial sample | 592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls |
Replication sample | NA |
Region | 16p12.1 |
Chromosome id | chr16 |
Chromosome position | 26505812 |
Reported gene | NR |
Mapped gene | LOC102723536 - LOC105371152 |
Upstream gene id | 102723536 |
Downstream gene id | 105371152 |
SNP gene ids | |
Upstream gene distance | 141755 |
Downstream gene distance | 78960 |
SNP risk allele | rs79090407-A |
SNPs | rs79090407 |
Merged | |
SNP id current | 79090407 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 1.12 |
%95 Ci | [NR] |
Platform | Illumina [7158791] (imputed) |
CNV | N |
Mapped trait | schizophrenia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000692 |
Study accession | GCST003048 |