SNP Detail For rs7905537
1.Mapping Information
Human SNP ID rs7905537
Human chromosome chr10
Human SNP position 33942347
Pig chromosome chr10
Pig SNP position 62440055
2.Annotation Information
PubMed ID20709820
JournalAm J Respir Crit Care Med
Linkwww.ncbi.nlm.nih.gov/pubmed/20709820
StudyGenome-wide association study identifies BICD1 as a susceptibility gene for emphysema.
Disease/TraitEmphysema-related traits
Initial sample2,383 European ancestry cases
Replication sampleNA
Region10p11.22
Chromosome idchr10
Chromosome position33942347
Reported genePARD3
Mapped geneLINC00838 - PARD3
Upstream gene id100505583
Downstream gene id56288
SNP gene ids
Upstream gene distance169667
Downstream gene distance167213
SNP risk allelers7905537-A
SNPsrs7905537
Merged0
SNP id current7905537
Contextintergenic_variant
Intergenic1
Allele frequency0.75
P value0.0000008
Pvalue mlog6.09691001300805
P value text(quantitative)
Or beta1.85
%95 Ci[NR] HU increase
PlatformIllumina [499578]
CNVN
Mapped traitemphysema
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000464
Study accessionGCST000770