Human SNP ID | rs7903338 |
---|---|
Human chromosome | chr10 |
Human SNP position | 97799964 |
Pig chromosome | chr14 |
Pig SNP position | 118664596 |
PubMed ID | 26584805 |
---|---|
Journal | Genes Nutr |
Link | www.ncbi.nlm.nih.gov/pubmed/26584805 |
Study | A genome-wide association study of n-3 and n-6 plasma fatty acids in a Singaporean Chinese population. |
Disease/Trait | Plasma omega-3 polyunsaturated fatty acid levels (alphalinolenic acid) |
Initial sample | 717 Singaporean Chinese ancestry myocardial infarction cases, 644 Singaporean Chinese ancestry controls |
Replication sample | NA |
Region | 10q24.2 |
Chromosome id | chr10 |
Chromosome position | 97799964 |
Reported gene | NR |
Mapped gene | SFRP5 - LINC00866 |
Upstream gene id | 6425 |
Downstream gene id | 100505561 |
SNP gene ids | |
Upstream gene distance | 27965 |
Downstream gene distance | 28514 |
SNP risk allele | rs7903338-C |
SNPs | rs7903338 |
Merged | |
SNP id current | 7903338 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.9789989 |
P value | 0.00000004 |
Pvalue mlog | 7.39794000867203 |
P value text | |
Or beta | 0.3463 |
%95 Ci | [0.22-0.47] unit decrease |
Platform | Illumina [up to 1980188] (imputed) |
CNV | N |
Mapped trait | |
Mapped trait URI | |
Study accession | GCST003242 |