SNP Detail For rs7903338
1.Mapping Information
Human SNP ID rs7903338
Human chromosome chr10
Human SNP position 97799964
Pig chromosome chr14
Pig SNP position 118664596
2.Annotation Information
PubMed ID26584805
JournalGenes Nutr
Linkwww.ncbi.nlm.nih.gov/pubmed/26584805
StudyA genome-wide association study of n-3 and n-6 plasma fatty acids in a Singaporean Chinese population.
Disease/TraitPlasma omega-3 polyunsaturated fatty acid levels (alphalinolenic acid)
Initial sample717 Singaporean Chinese ancestry myocardial infarction cases, 644 Singaporean Chinese ancestry controls
Replication sampleNA
Region10q24.2
Chromosome idchr10
Chromosome position97799964
Reported geneNR
Mapped geneSFRP5 - LINC00866
Upstream gene id6425
Downstream gene id100505561
SNP gene ids
Upstream gene distance27965
Downstream gene distance28514
SNP risk allelers7903338-C
SNPsrs7903338
Merged
SNP id current7903338
Contextintergenic_variant
Intergenic1
Allele frequency0.9789989
P value0.00000004
Pvalue mlog7.39794000867203
P value text
Or beta0.3463
%95 Ci[0.22-0.47] unit decrease
PlatformIllumina [up to 1980188] (imputed)
CNVN
Mapped trait
Mapped trait URI
Study accessionGCST003242